STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KON87941.1ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. (820 aa)    
Predicted Functional Partners:
KON87942.1
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KON88476.1
DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.878
KON90174.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.785
KON89152.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.768
rny
Ribonuclease; Endoribonuclease that initiates mRNA decay.
   
    0.762
iolB
5-deoxyglucuronate isomerase; Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D-gluconate).
   
    0.754
KON85662.1
DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.647
KON85664.1
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.640
KON85663.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.629
KON87943.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.594
Your Current Organism:
Sporosarcina globispora
NCBI taxonomy Id: 1459
Other names: ATCC 23301, Bacillus globisporus, CCM 2119, CCUG 7419, CIP 103266, DSM 4, HAMBI 471, IFO 16082, JCM 10046, LMG 6928, LMG:6928, NBRC 16082, NCIMB 11434, NRRL B-3396, S. globispora, strain 785, strain W 25, strain W25
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.