Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KON88358.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)    
Predicted Functional Partners:
KON88357.1
Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.937
KON90427.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.802
KON86020.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.616
KON90328.1
Cobalamin biosynthesis protein CbiE; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.600
KON89767.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.491
KON88890.1
Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.433
KON85588.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.432
KON85483.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.420
Your Current Organism:
Sporosarcina globispora
NCBI taxonomy Id: 1459
Other names: ATCC 23301, Bacillus globisporus, CCM 2119, CCUG 7419, CIP 103266, DSM 4, HAMBI 471, IFO 16082, JCM 10046, LMG 6928, LMG:6928, NBRC 16082, NCIMB 11434, NRRL B-3396, S. globispora, strain 785, strain W 25, strain W25
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