Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KON88360.1Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)    
Predicted Functional Partners:
KON87651.1
Nitrate/nitrite transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.841
KON89233.1
Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.812
KON90355.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.765
KON87609.1
ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.760
KON87287.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.750
KON88361.1
Nitrous oxidase accessory protein NosD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.729
KON87288.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.716
KON90038.1
Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.702
tatC
Preprotein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
    
 
 0.635
tatC-2
Preprotein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
    
 
 0.635
Your Current Organism:
Sporosarcina globispora
NCBI taxonomy Id: 1459
Other names: ATCC 23301, Bacillus globisporus, CCM 2119, CCUG 7419, CIP 103266, DSM 4, HAMBI 471, IFO 16082, JCM 10046, LMG 6928, LMG:6928, NBRC 16082, NCIMB 11434, NRRL B-3396, S. globispora, strain 785, strain W 25, strain W25
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