Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KON85500.1 | KON85683.1 | AF332_00520 | AF332_01795 | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
| KON85500.1 | KON85740.1 | AF332_00520 | AF332_02095 | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.679 |
| KON85500.1 | KON88374.1 | AF332_00520 | AF332_17225 | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.469 |
| KON85500.1 | KON89780.1 | AF332_00520 | AF332_25185 | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.610 |
| KON85500.1 | KON89831.1 | AF332_00520 | AF332_25455 | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Mg2+ transporter protein, CorA-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.600 |
| KON85500.1 | rsbW | AF332_00520 | AF332_01800 | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein kinase; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | 0.618 |
| KON85683.1 | KON85500.1 | AF332_01795 | AF332_00520 | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
| KON85683.1 | KON85740.1 | AF332_01795 | AF332_02095 | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.760 |
| KON85683.1 | KON86056.1 | AF332_01795 | AF332_03975 | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
| KON85683.1 | KON89780.1 | AF332_01795 | AF332_25185 | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.819 |
| KON85683.1 | KON89831.1 | AF332_01795 | AF332_25455 | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Mg2+ transporter protein, CorA-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
| KON85683.1 | rsbW | AF332_01795 | AF332_01800 | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein kinase; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | 0.998 |
| KON85740.1 | KON85500.1 | AF332_02095 | AF332_00520 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.679 |
| KON85740.1 | KON85683.1 | AF332_02095 | AF332_01795 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.760 |
| KON85740.1 | KON86056.1 | AF332_02095 | AF332_03975 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.760 |
| KON85740.1 | KON89780.1 | AF332_02095 | AF332_25185 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.837 |
| KON85740.1 | KON89831.1 | AF332_02095 | AF332_25455 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Mg2+ transporter protein, CorA-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.687 |
| KON85740.1 | rsbW | AF332_02095 | AF332_01800 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein kinase; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | 0.757 |
| KON86056.1 | KON85683.1 | AF332_03975 | AF332_01795 | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
| KON86056.1 | KON85740.1 | AF332_03975 | AF332_02095 | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.760 |
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