STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRZ13469.1Na+/H+ antiporter. (561 aa)    
Predicted Functional Partners:
CRZ13467.1
Ribose 5-phosphate isomerase.
       0.648
CRZ13468.1
formamidopyrimidine-DNA glycosylase; Belongs to the FPG family.
       0.648
CRZ13466.1
TetR family transcriptional regulator.
       0.594
CRZ17191.1
Hypothetical protein.
   
 0.588
CRZ13465.1
Oxidoreductase YdbC.
  
    0.437
yfkE
Putative cation exchanger YfkE; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.
    
 
 0.401
Your Current Organism:
Mycolicibacterium neworleansense
NCBI taxonomy Id: 146018
Other names: ATCC 49404, DSM 44679, JCM 15659, M. neworleansense, Mycobacterium genomospecies 2, Mycobacterium neworleansense, Mycobacterium neworleansense Schinsky et al. 2004, Mycolicibacterium neworleansense (Schinsky et al. 2004) Gupta et al. 2018, strain W6705
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.