Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRZ15629.1Transmembrane protein. (435 aa)    
Predicted Functional Partners:
CRZ15623.1
TetR family transcriptional regulator.
  
     0.661
CRZ16675.1
TetR family transcriptional regulator.
  
     0.632
CRZ16941.1
Transmembrane protein.
  
     0.524
CRZ16351.1
Carboxymuconolactone decarboxylase.
  
     0.520
CRZ16762.1
Transcriptional regulator.
  
     0.460
CRZ16674.1
4Fe-4S ferredoxin.
  
     0.430
CRZ15630.1
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase.
       0.428
CRZ17305.1
NADH:flavin oxidoreductase.
  
     0.415
CRZ18089.1
Hypothetical protein.
  
     0.415
CRZ16928.1
F5/8 type C domain-containing protein.
  
     0.405
Your Current Organism:
Mycolicibacterium neworleansense
NCBI taxonomy Id: 146018
Other names: ATCC 49404, DSM 44679, JCM 15659, M. neworleansense, Mycobacterium genomospecies 2, Mycobacterium neworleansense, Mycobacterium neworleansense Schinsky et al. 2004, Mycolicibacterium neworleansense (Schinsky et al. 2004) Gupta et al. 2018, strain W6705
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