STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRZ18534.1acyl-CoA dehydrogenase. (386 aa)    
Predicted Functional Partners:
CRZ18535.1
acetyl-CoA carboxylase, carboxyl transferase subunit alpha.
 
 
 0.989
CRZ18538.1
enoyl-CoA hydratase.
  
 0.989
CRZ18533.1
Hypothetical protein.
 
 
  0.985
CRZ18536.1
Pyruvate carboxylase.
  
 
 0.984
fadE12
acyl-CoA dehydrogenase.
 
   
0.977
CRZ18777.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.958
CRZ18351.1
3-hydroxyisobutyryl-CoA hydrolase.
   
 0.911
CRZ17611.1
enoyl-CoA hydratase.
   
 0.910
CRZ19054.1
enoyl-CoA hydratase.
   
 0.910
CRZ18994.1
enoyl-CoA hydratase.
   
 0.909
Your Current Organism:
Mycolicibacterium neworleansense
NCBI taxonomy Id: 146018
Other names: ATCC 49404, DSM 44679, JCM 15659, M. neworleansense, Mycobacterium genomospecies 2, Mycobacterium neworleansense, Mycobacterium neworleansense Schinsky et al. 2004, Mycolicibacterium neworleansense (Schinsky et al. 2004) Gupta et al. 2018, strain W6705
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