STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCB_0030GntR family transcriptional regulator. (231 aa)    
Predicted Functional Partners:
RMCB_4833
Transcriptional regulator.
  
  
 0.777
RMCB_0659
GntR family transcriptional regulator.
  
  
 0.776
RMCB_6907
Transcriptional regulator, GntR family.
  
  
 0.768
RMCB_5980
Putative GntR family transcriptional regulator.
  
  
 0.763
RMCB_6851
Transcriptional regulator.
  
  
 0.763
RMCB_6895
Bacterial regulatory s, gntR family protein.
  
  
 0.761
RMCB_3299
GntR family transcriptional regulator.
  
  
 0.754
RMCB_6046
GntR family transcriptional regulator.
  
  
 0.700
RMCB_6987
Regulatory protein GntR HTH.
  
    0.672
RMCB_0029
Proline racemase; Belongs to the proline racemase family.
 
     0.658
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.