Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCB_0051 | RMCB_0371 | RMCB_0051 | RMCB_0371 | Deazaflavin-dependent nitroreductase family protein. | Luciferase-like oxidoreductase. | 0.725 |
RMCB_0051 | RMCB_0728 | RMCB_0051 | RMCB_0728 | Deazaflavin-dependent nitroreductase family protein. | Luciferase-like protein. | 0.790 |
RMCB_0051 | RMCB_1038 | RMCB_0051 | RMCB_1038 | Deazaflavin-dependent nitroreductase family protein. | Coenzyme F420-dependent oxidoreductase. | 0.737 |
RMCB_0051 | RMCB_1560 | RMCB_0051 | RMCB_1560 | Deazaflavin-dependent nitroreductase family protein. | Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein. | 0.753 |
RMCB_0051 | RMCB_2323 | RMCB_0051 | RMCB_2323 | Deazaflavin-dependent nitroreductase family protein. | Oxidoreductase. | 0.747 |
RMCB_0051 | RMCB_3509 | RMCB_0051 | RMCB_3509 | Deazaflavin-dependent nitroreductase family protein. | Monooxygenase. | 0.813 |
RMCB_0051 | RMCB_3826 | RMCB_0051 | RMCB_3826 | Deazaflavin-dependent nitroreductase family protein. | Oxidoreductase. | 0.727 |
RMCB_0051 | RMCB_5831 | RMCB_0051 | RMCB_5831 | Deazaflavin-dependent nitroreductase family protein. | Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase. | 0.747 |
RMCB_0051 | RMCB_5875 | RMCB_0051 | RMCB_5875 | Deazaflavin-dependent nitroreductase family protein. | LPPG, FO 2-phospho-L-lactate transferase. | 0.767 |
RMCB_0051 | fgd | RMCB_0051 | RMCB_0855 | Deazaflavin-dependent nitroreductase family protein. | F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. | 0.856 |
RMCB_0371 | RMCB_0051 | RMCB_0371 | RMCB_0051 | Luciferase-like oxidoreductase. | Deazaflavin-dependent nitroreductase family protein. | 0.725 |
RMCB_0371 | RMCB_0728 | RMCB_0371 | RMCB_0728 | Luciferase-like oxidoreductase. | Luciferase-like protein. | 0.653 |
RMCB_0371 | RMCB_1560 | RMCB_0371 | RMCB_1560 | Luciferase-like oxidoreductase. | Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein. | 0.556 |
RMCB_0371 | RMCB_3509 | RMCB_0371 | RMCB_3509 | Luciferase-like oxidoreductase. | Monooxygenase. | 0.635 |
RMCB_0371 | RMCB_5831 | RMCB_0371 | RMCB_5831 | Luciferase-like oxidoreductase. | Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase. | 0.543 |
RMCB_0371 | RMCB_5875 | RMCB_0371 | RMCB_5875 | Luciferase-like oxidoreductase. | LPPG, FO 2-phospho-L-lactate transferase. | 0.765 |
RMCB_0371 | fgd | RMCB_0371 | RMCB_0855 | Luciferase-like oxidoreductase. | F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. | 0.594 |
RMCB_0728 | RMCB_0051 | RMCB_0728 | RMCB_0051 | Luciferase-like protein. | Deazaflavin-dependent nitroreductase family protein. | 0.790 |
RMCB_0728 | RMCB_0371 | RMCB_0728 | RMCB_0371 | Luciferase-like protein. | Luciferase-like oxidoreductase. | 0.653 |
RMCB_0728 | RMCB_5875 | RMCB_0728 | RMCB_5875 | Luciferase-like protein. | LPPG, FO 2-phospho-L-lactate transferase. | 0.623 |
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