Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCB_0257 | RMCB_0364 | Two-component system response regulator. | Two-component system sensor kinase. | 0.920 |
RMCB_0257 | RMCB_3063 | Two-component system response regulator. | Nitrate/nitrite response transcriptional regulatory protein narL. | 0.607 |
RMCB_0257 | RMCB_5528 | Two-component system response regulator. | Two component LuxR family transcriptional regulator. | 0.563 |
RMCB_0363 | RMCB_0364 | Two-component system response regulator. | Two-component system sensor kinase. | 0.982 |
RMCB_0363 | RMCB_3063 | Two-component system response regulator. | Nitrate/nitrite response transcriptional regulatory protein narL. | 0.620 |
RMCB_0363 | RMCB_5528 | Two-component system response regulator. | Two component LuxR family transcriptional regulator. | 0.568 |
RMCB_0364 | RMCB_0257 | Two-component system sensor kinase. | Two-component system response regulator. | 0.920 |
RMCB_0364 | RMCB_0363 | Two-component system sensor kinase. | Two-component system response regulator. | 0.982 |
RMCB_0364 | RMCB_0482 | Two-component system sensor kinase. | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.897 |
RMCB_0364 | RMCB_1086 | Two-component system sensor kinase. | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.895 |
RMCB_0364 | RMCB_1649 | Two-component system sensor kinase. | LuxR family two component transcriptional regulator. | 0.910 |
RMCB_0364 | RMCB_2663 | Two-component system sensor kinase. | Two-component system response regulator. | 0.920 |
RMCB_0364 | RMCB_3063 | Two-component system sensor kinase. | Nitrate/nitrite response transcriptional regulatory protein narL. | 0.896 |
RMCB_0364 | RMCB_3360 | Two-component system sensor kinase. | Two-component system response regulator. | 0.911 |
RMCB_0364 | RMCB_5528 | Two-component system sensor kinase. | Two component LuxR family transcriptional regulator. | 0.905 |
RMCB_0364 | RMCB_6885 | Two-component system sensor kinase. | LuxR family transcriptional regulator. | 0.924 |
RMCB_0482 | RMCB_0364 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Two-component system sensor kinase. | 0.897 |
RMCB_0482 | RMCB_3063 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Nitrate/nitrite response transcriptional regulatory protein narL. | 0.598 |
RMCB_0482 | RMCB_5528 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Two component LuxR family transcriptional regulator. | 0.539 |
RMCB_1086 | RMCB_0364 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Two-component system sensor kinase. | 0.895 |
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