Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCB_0982 | RMCB_0987 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | MaoC-like dehydratase. | 0.895 |
RMCB_0982 | RMCB_0988 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Lipid-transfer protein. | 0.886 |
RMCB_0982 | RMCB_1035 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Lipid carrier protein or keto acyl-CoA thiolase ltp3. | 0.953 |
RMCB_0982 | RMCB_1036 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Lipid-transfer protein. | 0.766 |
RMCB_0982 | RMCB_1037 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Nucleic acid-binding protein. | 0.885 |
RMCB_0982 | RMCB_1038 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Coenzyme F420-dependent oxidoreductase. | 0.422 |
RMCB_0982 | RMCB_4271 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Dehydratase. | 0.424 |
RMCB_0982 | RMCB_6312 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | enoyl-CoA hydratase. | 0.839 |
RMCB_0987 | RMCB_0982 | MaoC-like dehydratase. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.895 |
RMCB_0987 | RMCB_0988 | MaoC-like dehydratase. | Lipid-transfer protein. | 0.989 |
RMCB_0987 | RMCB_1033 | MaoC-like dehydratase. | Ketosteroid isomerase-like protein. | 0.762 |
RMCB_0987 | RMCB_1034 | MaoC-like dehydratase. | Oxidoreductase. | 0.680 |
RMCB_0987 | RMCB_1035 | MaoC-like dehydratase. | Lipid carrier protein or keto acyl-CoA thiolase ltp3. | 0.856 |
RMCB_0987 | RMCB_1036 | MaoC-like dehydratase. | Lipid-transfer protein. | 0.860 |
RMCB_0987 | RMCB_1037 | MaoC-like dehydratase. | Nucleic acid-binding protein. | 0.884 |
RMCB_0987 | RMCB_6312 | MaoC-like dehydratase. | enoyl-CoA hydratase. | 0.566 |
RMCB_0988 | RMCB_0982 | Lipid-transfer protein. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.886 |
RMCB_0988 | RMCB_0987 | Lipid-transfer protein. | MaoC-like dehydratase. | 0.989 |
RMCB_0988 | RMCB_1033 | Lipid-transfer protein. | Ketosteroid isomerase-like protein. | 0.414 |
RMCB_0988 | RMCB_1035 | Lipid-transfer protein. | Lipid carrier protein or keto acyl-CoA thiolase ltp3. | 0.744 |
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