STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCB_1055Cutinase cut4; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle. (220 aa)    
Predicted Functional Partners:
RMCB_1054
Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.
 
    
0.758
RMCB_3410
Type VII secretion protein EccB, Actinobacterial.
  
 
  0.719
RMCB_0451
Cellulase celA1; Belongs to the glycosyl hydrolase family 6.
 
 0.707
RMCB_1451
Hypothetical protein.
  
 0.698
RMCB_1056
Cutinase cut2; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.
 
    
0.659
RMCB_1526
Chitinase.
  
 0.658
RMCB_3915
Predicted protein.
  
 
  0.640
RMCB_2758
FHA domain-containing protein.
  
 
  0.622
RMCB_0112
Uncharacterized protein.
   
 0.616
RMCB_0610
Uncharacterized protein.
   
 0.616
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
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