STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCB_2448Uncharacterized protein. (184 aa)    
Predicted Functional Partners:
RMCB_2449
Uncharacterized protein.
       0.803
RMCB_2450
Hypothetical protein.
       0.803
RMCB_1269
Transport-associated protein.
  
  
 0.701
RMCB_7016
Protein of unknown function duf1458.
   
    0.552
RMCB_5394
NAD-dependent epimerase/dehydratase.
   
    0.544
RMCB_6960
OsmC-like protein.
  
  
 0.544
RMCB_2120
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein.
  
    0.533
RMCB_2626
Pyridoxamine 5'-phosphate oxidase.
  
    0.533
RMCB_3124
Pyridoxamine 5'-phosphate oxidase.
  
    0.533
RMCB_4388
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
  
    0.533
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.