STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCB_2637Putative transcriptional regulator. (274 aa)    
Predicted Functional Partners:
RMCB_2636
Putative transcriptional regulator.
 
     0.920
RMCB_1930
Sugar diacid utilization regulator.
  
     0.664
RMCB_4697
Regulatory protein.
  
     0.501
RMCB_1116
Poly(3-hydroxyalkanoate) depolymerase.
 
     0.486
RMCB_3595
Putative regulatory protein.
  
     0.486
RMCB_2635
Molecular chaperone Hsp31 and glyoxalase 3.
       0.479
RMCB_1115
Poly(3-hydroxyalkanoate) synthetase.
 
     0.419
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.