STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCB_2761Signal transduction histidine kinase, precursor. (729 aa)    
Predicted Functional Partners:
RMCB_2760
Two component LuxR family transcriptional regulator.
 
  0.894
RMCB_5129
Response regulator receiver protein.
 
  0.725
RMCB_2512
Uncharacterized protein.
   
    0.724
RMCB_2764
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  0.689
RMCB_2411
GAF sensor-containing diguanylate cyclase/phosphodiesterase.
   
 0.681
RMCB_3005
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
  0.643
RMCB_3643
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  0.640
RMCB_3360
Two-component system response regulator.
 
  0.637
RMCB_3063
Nitrate/nitrite response transcriptional regulatory protein narL.
 
  0.634
RMCB_6885
LuxR family transcriptional regulator.
 
  0.632
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
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