STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCB_2858Sugar kinase. (310 aa)    
Predicted Functional Partners:
RMCB_2485
PTS system, glucose-specific IIBC component.
  
 0.955
RMCB_3085
PTS system D-fructose-specific IIABC component (F1P-forming), Frc family.
    
 0.889
RMCB_2856
Alpha-mannosidase.
 
 
 0.832
RMCB_2857
Malonyl CoA-acyl carrier protein transacylase fabD2.
  
    0.748
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.735
RMCB_5125
Polyphosphate glucokinase ppgK.
     
 0.730
RMCB_2466
Phosphoglucomutase.
    
 0.720
RMCB_2484
PTS system sugar phosphotransferase component IIA.
  
 
 0.714
RMCB_3734
Uncharacterized protein.
  
  
 
0.697
RMCB_3271
Aldose 1-epimerase.
    
 0.696
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
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