Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCB_2369 | RMCB_2371 | ESX-2 secretion system protein EccE2. | Type VII secretion integral membrane protein Ecc D. | 0.985 |
RMCB_2369 | RMCB_2374 | ESX-2 secretion system protein EccE2. | Protease; Belongs to the peptidase S8 family. | 0.455 |
RMCB_2369 | RMCB_3027 | ESX-2 secretion system protein EccE2. | Uncharacterized protein. | 0.569 |
RMCB_2369 | RMCB_5036 | ESX-2 secretion system protein EccE2. | Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase. | 0.629 |
RMCB_2371 | RMCB_2369 | Type VII secretion integral membrane protein Ecc D. | ESX-2 secretion system protein EccE2. | 0.985 |
RMCB_2371 | RMCB_2374 | Type VII secretion integral membrane protein Ecc D. | Protease; Belongs to the peptidase S8 family. | 0.984 |
RMCB_2371 | RMCB_3027 | Type VII secretion integral membrane protein Ecc D. | Uncharacterized protein. | 0.707 |
RMCB_2371 | RMCB_3092 | Type VII secretion integral membrane protein Ecc D. | Membrane-anchored mycosin mycP1. | 0.955 |
RMCB_2371 | RMCB_3418 | Type VII secretion integral membrane protein Ecc D. | Membrane-anchored mycosin mycP3. | 0.955 |
RMCB_2371 | RMCB_3777 | Type VII secretion integral membrane protein Ecc D. | Subtilase; Belongs to the peptidase S8 family. | 0.949 |
RMCB_2371 | RMCB_4229 | Type VII secretion integral membrane protein Ecc D. | Peptidase S8 and S53, subtilisin, kexin, sedolisin. | 0.745 |
RMCB_2371 | RMCB_5036 | Type VII secretion integral membrane protein Ecc D. | Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase. | 0.688 |
RMCB_2374 | RMCB_2369 | Protease; Belongs to the peptidase S8 family. | ESX-2 secretion system protein EccE2. | 0.455 |
RMCB_2374 | RMCB_2371 | Protease; Belongs to the peptidase S8 family. | Type VII secretion integral membrane protein Ecc D. | 0.984 |
RMCB_2374 | RMCB_3027 | Protease; Belongs to the peptidase S8 family. | Uncharacterized protein. | 0.612 |
RMCB_3027 | RMCB_2369 | Uncharacterized protein. | ESX-2 secretion system protein EccE2. | 0.569 |
RMCB_3027 | RMCB_2371 | Uncharacterized protein. | Type VII secretion integral membrane protein Ecc D. | 0.707 |
RMCB_3027 | RMCB_2374 | Uncharacterized protein. | Protease; Belongs to the peptidase S8 family. | 0.612 |
RMCB_3027 | RMCB_3092 | Uncharacterized protein. | Membrane-anchored mycosin mycP1. | 0.612 |
RMCB_3027 | RMCB_3418 | Uncharacterized protein. | Membrane-anchored mycosin mycP3. | 0.612 |
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