Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCB_3203Beta-ketoacyl synthase. (178 aa)    
Predicted Functional Partners:
RMCB_6726
Fatty acid synthase.
  
 0.999
RMCB_6833
Phenolpthiocerol synthesis type-I polyketide synthase ppsC.
 0.999
RMCB_7128
Beta-ketoacyl synthase.
 0.999
RMCB_0232
Phenyloxazoline synthase mbtB.
 
 0.997
RMCB_2204
Linear gramicidin synthetase subunit D.
 
 0.992
RMCB_6291
acyl-CoA synthetase.
 0.980
RMCB_6308
acyl-CoA synthetase.
 0.979
RMCB_6927
fatty-acid--CoA ligase fadD21.
 0.976
RMCB_4975
long-chain-fatty-acid--CoA ligase.
 0.970
RMCB_0236
Peptide synthetase mbtE.
 
 0.969
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.