Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCB_2427 | RMCB_3332 | RMCB_2427 | RMCB_3332 | Urea amidolyase. | Hydrolase. | 0.870 |
RMCB_2427 | RMCB_4150 | RMCB_2427 | RMCB_4150 | Urea amidolyase. | Isochorismatase hydrolase. | 0.882 |
RMCB_3332 | RMCB_2427 | RMCB_3332 | RMCB_2427 | Hydrolase. | Urea amidolyase. | 0.870 |
RMCB_3332 | RMCB_4150 | RMCB_3332 | RMCB_4150 | Hydrolase. | Isochorismatase hydrolase. | 0.766 |
RMCB_4143 | RMCB_4144 | RMCB_4143 | RMCB_4144 | 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Uncharacterized protein. | 0.793 |
RMCB_4143 | RMCB_4146 | RMCB_4143 | RMCB_4146 | 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Hydantoin racemase. | 0.782 |
RMCB_4143 | RMCB_4147 | RMCB_4143 | RMCB_4147 | 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Allantoinase. | 0.782 |
RMCB_4143 | RMCB_4148 | RMCB_4143 | RMCB_4148 | 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Beta-lactamase domain-containing protein. | 0.773 |
RMCB_4143 | RMCB_4149 | RMCB_4143 | RMCB_4149 | 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Extracellular solute-binding protein. | 0.773 |
RMCB_4143 | RMCB_4150 | RMCB_4143 | RMCB_4150 | 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Isochorismatase hydrolase. | 0.808 |
RMCB_4143 | RMCB_4151 | RMCB_4143 | RMCB_4151 | 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Binding-protein-dependent transport systems inner membrane component. | 0.774 |
RMCB_4143 | alc-2 | RMCB_4143 | RMCB_4145 | 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Allantoicase; Belongs to the allantoicase family. | 0.789 |
RMCB_4144 | RMCB_4143 | RMCB_4144 | RMCB_4143 | Uncharacterized protein. | 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.793 |
RMCB_4144 | RMCB_4146 | RMCB_4144 | RMCB_4146 | Uncharacterized protein. | Hydantoin racemase. | 0.782 |
RMCB_4144 | RMCB_4147 | RMCB_4144 | RMCB_4147 | Uncharacterized protein. | Allantoinase. | 0.782 |
RMCB_4144 | RMCB_4148 | RMCB_4144 | RMCB_4148 | Uncharacterized protein. | Beta-lactamase domain-containing protein. | 0.796 |
RMCB_4144 | RMCB_4149 | RMCB_4144 | RMCB_4149 | Uncharacterized protein. | Extracellular solute-binding protein. | 0.773 |
RMCB_4144 | RMCB_4150 | RMCB_4144 | RMCB_4150 | Uncharacterized protein. | Isochorismatase hydrolase. | 0.785 |
RMCB_4144 | RMCB_4151 | RMCB_4144 | RMCB_4151 | Uncharacterized protein. | Binding-protein-dependent transport systems inner membrane component. | 0.773 |
RMCB_4144 | alc-2 | RMCB_4144 | RMCB_4145 | Uncharacterized protein. | Allantoicase; Belongs to the allantoicase family. | 0.789 |
page 1 of 4