STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCB_4247Alcohol dehydrogenase. (371 aa)    
Predicted Functional Partners:
RMCB_5523
Iron-containing alcohol dehydrogenase.
    
 0.876
RMCB_5526
Alcohol dehydrogenase, class IV.
    
 0.830
RMCB_6137
Iron-containing alcohol dehydrogenase.
    
 0.830
RMCB_4761
Zn-dependent alcohol dehydrogenase.
  
 
0.797
RMCB_4156
NADP-dependent alcohol dehydrogenase C.
  
 
0.779
RMCB_4293
Uncharacterized protein.
    
 0.734
RMCB_6528
Alcohol dehydrogenase.
  
 
0.734
RMCB_0724
Zn-dependent alcohol dehydrogenase.
  
 
0.733
RMCB_4246
Putative O-succinylbenzoate--CoA ligase.
  
    0.727
RMCB_1501
Zn-dependent alcohol dehydrogenase.
  
 
0.714
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.