STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCB_4549Membrane protein. (398 aa)    
Predicted Functional Partners:
RMCB_3438
Molecular chaperone.
 
     0.674
RMCB_2758
FHA domain-containing protein.
 
     0.634
RMCB_5000
Conserved membrane protein of unknown function.
  
     0.589
RMCB_5596
Molecular chaperone.
 
     0.587
RMCB_2340
Hypothetical protein.
  
     0.582
RMCB_3503
Uncharacterized protein.
 
     0.572
RMCB_4550
NAD-dependent epimerase/dehydratase.
       0.569
RMCB_3798
Uncharacterized protein.
 
     0.560
RMCB_3498
Molecular chaperone.
 
     0.552
RMCB_6952
Aminoglycoside 2'-N-acetyltransferase.
  
     0.521
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.