Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RMCB_4792Sugar-transport integral membrane protein ABC transporter uspA. (290 aa)    
Predicted Functional Partners:
RMCB_4793
Sugar-transport integral membrane protein ABC transporter uspB.
 
 0.998
RMCB_4794
Periplasmic sugar-binding lipoprotein uspC.
 
 0.997
RMCB_0265
Sugar-transport ATP-binding protein ABC transporter sugC; Belongs to the ABC transporter superfamily.
 
 0.954
RMCB_0543
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.953
RMCB_2632
ABC transporter--like protein; Belongs to the ABC transporter superfamily.
 
 0.953
ugpC
Sugar ABC transporter ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.953
RMCB_3852
Extracellular solute-binding protein family 1.
 
 0.952
RMCB_3253
ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.950
RMCB_1959
ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.946
RMCB_1958
Binding-protein-dependent transport system inner membrane protein.
 
 0.942
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
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