STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCB_5066Uncharacterized protein. (61 aa)    
Predicted Functional Partners:
RMCB_5065
Uncharacterized protein.
       0.845
RMCB_5067
Uncharacterized protein.
       0.844
RMCB_5068
Putative uncharacterized protein.
       0.843
RMCB_5069
Pyrazinamidase/nicotinamidase pncA.
       0.754
RMCB_5064
Uncharacterized protein.
       0.535
RMCB_5070
Glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
       0.478
RMCB_5061
AraC family transcriptional regulator.
       0.460
RMCB_5062
Glyoxalase/bleomycin resistance protein/dioxygenase.
       0.460
RMCB_5063
Excinuclease ABC subunit A.
       0.460
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.