Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCB_5231 | RMCB_5232 | Uncharacterized protein. | Hypothetical protein. | 0.675 |
RMCB_5231 | RMCB_5233 | Uncharacterized protein. | Alanine rich transferase. | 0.675 |
RMCB_5231 | RMCB_5234 | Uncharacterized protein. | Limonene-1,2-epoxide hydrolase. | 0.490 |
RMCB_5231 | RMCB_5235 | Uncharacterized protein. | Membrane protein. | 0.463 |
RMCB_5232 | RMCB_5231 | Hypothetical protein. | Uncharacterized protein. | 0.675 |
RMCB_5232 | RMCB_5233 | Hypothetical protein. | Alanine rich transferase. | 0.891 |
RMCB_5232 | RMCB_5234 | Hypothetical protein. | Limonene-1,2-epoxide hydrolase. | 0.698 |
RMCB_5232 | RMCB_5235 | Hypothetical protein. | Membrane protein. | 0.595 |
RMCB_5233 | RMCB_5231 | Alanine rich transferase. | Uncharacterized protein. | 0.675 |
RMCB_5233 | RMCB_5232 | Alanine rich transferase. | Hypothetical protein. | 0.891 |
RMCB_5233 | RMCB_5234 | Alanine rich transferase. | Limonene-1,2-epoxide hydrolase. | 0.790 |
RMCB_5233 | RMCB_5235 | Alanine rich transferase. | Membrane protein. | 0.663 |
RMCB_5234 | RMCB_5231 | Limonene-1,2-epoxide hydrolase. | Uncharacterized protein. | 0.490 |
RMCB_5234 | RMCB_5232 | Limonene-1,2-epoxide hydrolase. | Hypothetical protein. | 0.698 |
RMCB_5234 | RMCB_5233 | Limonene-1,2-epoxide hydrolase. | Alanine rich transferase. | 0.790 |
RMCB_5234 | RMCB_5235 | Limonene-1,2-epoxide hydrolase. | Membrane protein. | 0.777 |
RMCB_5235 | RMCB_5231 | Membrane protein. | Uncharacterized protein. | 0.463 |
RMCB_5235 | RMCB_5232 | Membrane protein. | Hypothetical protein. | 0.595 |
RMCB_5235 | RMCB_5233 | Membrane protein. | Alanine rich transferase. | 0.663 |
RMCB_5235 | RMCB_5234 | Membrane protein. | Limonene-1,2-epoxide hydrolase. | 0.777 |