Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCB_5752 | RMCB_5753 | Immunogenic protein MPT63. | Short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.537 |
RMCB_5752 | RMCB_5754 | Immunogenic protein MPT63. | Uncharacterized protein, precursor. | 0.533 |
RMCB_5752 | RMCB_5755 | Immunogenic protein MPT63. | Metallophosphoesterase. | 0.533 |
RMCB_5752 | RMCB_5756 | Immunogenic protein MPT63. | Plastocyanin. | 0.533 |
RMCB_5752 | RMCB_5757 | Immunogenic protein MPT63. | Expressed protein. | 0.408 |
RMCB_5753 | RMCB_5752 | Short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Immunogenic protein MPT63. | 0.537 |
RMCB_5753 | RMCB_5754 | Short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Uncharacterized protein, precursor. | 0.773 |
RMCB_5753 | RMCB_5755 | Short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Metallophosphoesterase. | 0.788 |
RMCB_5753 | RMCB_5756 | Short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Plastocyanin. | 0.773 |
RMCB_5753 | RMCB_5757 | Short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Expressed protein. | 0.572 |
RMCB_5754 | RMCB_5752 | Uncharacterized protein, precursor. | Immunogenic protein MPT63. | 0.533 |
RMCB_5754 | RMCB_5753 | Uncharacterized protein, precursor. | Short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.773 |
RMCB_5754 | RMCB_5755 | Uncharacterized protein, precursor. | Metallophosphoesterase. | 0.847 |
RMCB_5754 | RMCB_5756 | Uncharacterized protein, precursor. | Plastocyanin. | 0.810 |
RMCB_5754 | RMCB_5757 | Uncharacterized protein, precursor. | Expressed protein. | 0.572 |
RMCB_5754 | RMCB_5759 | Uncharacterized protein, precursor. | Rieske (2Fe-2S) domain-containing protein. | 0.415 |
RMCB_5755 | RMCB_5752 | Metallophosphoesterase. | Immunogenic protein MPT63. | 0.533 |
RMCB_5755 | RMCB_5753 | Metallophosphoesterase. | Short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.788 |
RMCB_5755 | RMCB_5754 | Metallophosphoesterase. | Uncharacterized protein, precursor. | 0.847 |
RMCB_5755 | RMCB_5756 | Metallophosphoesterase. | Plastocyanin. | 0.908 |
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