Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCB_6176 | RMCB_6177 | Uncharacterized protein. | Transcriptional regulator. | 0.443 |
RMCB_6176 | RMCB_6178 | Uncharacterized protein. | Ferredoxin. | 0.443 |
RMCB_6176 | RMCB_6179 | Uncharacterized protein. | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component. | 0.435 |
RMCB_6176 | RMCB_6180 | Uncharacterized protein. | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | 0.435 |
RMCB_6176 | RMCB_6181 | Uncharacterized protein. | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. | 0.435 |
RMCB_6176 | RMCB_6182 | Uncharacterized protein. | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | 0.435 |
RMCB_6177 | RMCB_6176 | Transcriptional regulator. | Uncharacterized protein. | 0.443 |
RMCB_6177 | RMCB_6178 | Transcriptional regulator. | Ferredoxin. | 0.966 |
RMCB_6177 | RMCB_6179 | Transcriptional regulator. | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component. | 0.966 |
RMCB_6177 | RMCB_6180 | Transcriptional regulator. | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | 0.919 |
RMCB_6177 | RMCB_6181 | Transcriptional regulator. | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. | 0.899 |
RMCB_6177 | RMCB_6182 | Transcriptional regulator. | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | 0.964 |
RMCB_6178 | RMCB_6176 | Ferredoxin. | Uncharacterized protein. | 0.443 |
RMCB_6178 | RMCB_6177 | Ferredoxin. | Transcriptional regulator. | 0.966 |
RMCB_6178 | RMCB_6179 | Ferredoxin. | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component. | 0.956 |
RMCB_6178 | RMCB_6180 | Ferredoxin. | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | 0.968 |
RMCB_6178 | RMCB_6181 | Ferredoxin. | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. | 0.935 |
RMCB_6178 | RMCB_6182 | Ferredoxin. | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | 0.991 |
RMCB_6179 | RMCB_6176 | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component. | Uncharacterized protein. | 0.435 |
RMCB_6179 | RMCB_6177 | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component. | Transcriptional regulator. | 0.966 |
page 1 of 3