Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCB_1911 | RMCB_6189 | RMCB_1911 | RMCB_6189 | Glutamate synthase (NADPH/NADH) large chain. | Export or membrane protein. | 0.869 |
RMCB_1911 | argF | RMCB_1911 | RMCB_4475 | Glutamate synthase (NADPH/NADH) large chain. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.694 |
RMCB_1911 | argG | RMCB_1911 | RMCB_4477 | Glutamate synthase (NADPH/NADH) large chain. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.930 |
RMCB_1911 | carA | RMCB_1911 | RMCB_6190 | Glutamate synthase (NADPH/NADH) large chain. | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | 0.948 |
RMCB_1911 | carB | RMCB_1911 | RMCB_6191 | Glutamate synthase (NADPH/NADH) large chain. | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | 0.966 |
RMCB_1911 | purF | RMCB_1911 | RMCB_6414 | Glutamate synthase (NADPH/NADH) large chain. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.957 |
RMCB_3583 | RMCB_6189 | RMCB_3583 | RMCB_6189 | Allantoinase. | Export or membrane protein. | 0.759 |
RMCB_3583 | carA | RMCB_3583 | RMCB_6190 | Allantoinase. | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | 0.980 |
RMCB_3583 | carB | RMCB_3583 | RMCB_6191 | Allantoinase. | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | 0.973 |
RMCB_3583 | pyrB | RMCB_3583 | RMCB_6187 | Allantoinase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
RMCB_3583 | pyrC | RMCB_3583 | RMCB_6188 | Allantoinase. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.718 |
RMCB_3583 | pyrF | RMCB_3583 | RMCB_6192 | Allantoinase. | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.838 |
RMCB_6189 | RMCB_1911 | RMCB_6189 | RMCB_1911 | Export or membrane protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.869 |
RMCB_6189 | RMCB_3583 | RMCB_6189 | RMCB_3583 | Export or membrane protein. | Allantoinase. | 0.759 |
RMCB_6189 | argF | RMCB_6189 | RMCB_4475 | Export or membrane protein. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.787 |
RMCB_6189 | argG | RMCB_6189 | RMCB_4477 | Export or membrane protein. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.797 |
RMCB_6189 | carA | RMCB_6189 | RMCB_6190 | Export or membrane protein. | Carbamoyl phosphate synthase small subunit; Belongs to the CarA family. | 0.980 |
RMCB_6189 | carB | RMCB_6189 | RMCB_6191 | Export or membrane protein. | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | 0.997 |
RMCB_6189 | purF | RMCB_6189 | RMCB_6414 | Export or membrane protein. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.813 |
RMCB_6189 | pyrB | RMCB_6189 | RMCB_6187 | Export or membrane protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.990 |
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