STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCB_6711Nucleic acid-binding protein. (143 aa)    
Predicted Functional Partners:
RMCB_6710
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.985
RMCB_6674
acetyl-CoA acetyltransferase.
 
  0.917
RMCB_4417
Lipid-transfer protein.
 
 0.895
RMCB_5947
Sterol carrier protein.
 
 0.843
RMCB_4265
acetyl-CoA acetyltransferase.
 
 0.833
RMCB_1036
Lipid-transfer protein.
  
 0.816
RMCB_0988
Lipid-transfer protein.
 
 0.808
RMCB_4256
acetyl-CoA acetyltransferase.
 
  0.803
RMCB_0576
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.796
RMCB_1338
acetyl-CoA acetyltransferase.
 
  0.789
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
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