STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCB_6924SL659 acyltransferase papA1. (473 aa)    
Predicted Functional Partners:
RMCB_6923
Beta-ketoacyl synthase.
 
     0.806
RMCB_6925
MmpL protein.
 
     0.788
RMCB_6289
Uncharacterized protein.
 
     0.771
RMCB_6290
Uncharacterized protein.
 
     0.771
RMCB_5675
Uncharacterized protein.
  
     0.754
RMCB_2214
Glycosyl transferase.
  
     0.734
RMCB_2208
Glycosyl transferase, UDP-glucuronosyltransferase.
  
     0.730
RMCB_3431
Sulfotransferase; Catalyzes the sulfuryl group transfer from 3'- phosphoadenosine-5'-phosphosulfate (PAPS) to trehalose, leading to trehalose-2-sulfate (T2S).
  
     0.727
RMCB_3894
Transcriptional regulator.
  
     0.724
RMCB_5533
Methylase, ubiquinone/menaquinone biosynthesis.
  
     0.722
Your Current Organism:
Mycolicibacterium brisbanense
NCBI taxonomy Id: 146020
Other names: ATCC 49938, CCUG 47584, DSM 44680, JCM 15654, M. brisbanense, Mycobacterium brisbanense, Mycobacterium brisbanense Schinsky et al. 2004, Mycobacterium genomospecies 4, Mycolicibacterium brisbanense (Schinsky et al. 2004) Gupta et al. 2018, strain W6743
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