STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900078665_00854Unannotated protein. (965 aa)    
Predicted Functional Partners:
GCA_900078665_00853
Unannotated protein.
       0.773
GCA_900078665_03532
Unannotated protein.
  
     0.701
GCA_900078665_00808
Unannotated protein.
  
     0.683
GCA_900078665_00478
Unannotated protein.
  
     0.664
GCA_900078665_00855
Unannotated protein.
 
    
0.645
GCA_900078665_02347
Unannotated protein.
  
     0.611
GCA_900078665_05447
Unannotated protein.
  
     0.552
GCA_900078665_05491
Unannotated protein.
  
     0.511
GCA_900078665_03540
Unannotated protein.
  
     0.509
GCA_900078665_03925
Unannotated protein.
  
     0.507
Your Current Organism:
Mycolicibacterium houstonense
NCBI taxonomy Id: 146021
Other names: ATCC 49403, DSM 44676, JCM 15656, M. houstonense, Mycobacterium houstonense, Mycobacterium houstonense Schinsky et al. 2004, strain W5198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.