STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900078665_04295Unannotated protein. (174 aa)    
Predicted Functional Partners:
GCA_900078665_06197
Unannotated protein.
    
 0.872
GCA_900078665_04499
Unannotated protein.
  
 0.871
GCA_900078665_04296
Unannotated protein.
 
     0.867
GCA_900078665_00745
Unannotated protein.
   
 0.861
GCA_900078665_00747
Unannotated protein.
   
 0.861
GCA_900078665_03350
Unannotated protein.
   
 0.861
GCA_900078665_03752
Unannotated protein.
   
 0.861
GCA_900078665_03753
Unannotated protein.
   
 0.861
GCA_900078665_01906
Unannotated protein.
   
 0.854
GCA_900078665_01432
Unannotated protein.
    
  0.853
Your Current Organism:
Mycolicibacterium houstonense
NCBI taxonomy Id: 146021
Other names: ATCC 49403, DSM 44676, JCM 15656, M. houstonense, Mycobacterium houstonense, Mycobacterium houstonense Schinsky et al. 2004, strain W5198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.