STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900078665_05728Unannotated protein. (115 aa)    
Predicted Functional Partners:
GCA_900078665_05727
Unannotated protein.
      0.976
GCA_900078665_05726
Unannotated protein.
  
   0.906
GCA_900078665_05722
Unannotated protein.
       0.865
GCA_900078665_05724
Unannotated protein.
       0.865
GCA_900078665_05721
Unannotated protein.
       0.816
GCA_900078665_05725
Unannotated protein.
       0.748
GCA_900078665_05723
Unannotated protein.
       0.728
GCA_900078665_05730
Unannotated protein.
       0.554
GCA_900078665_05731
Unannotated protein.
       0.554
GCA_900078665_05732
Unannotated protein.
       0.554
Your Current Organism:
Mycolicibacterium houstonense
NCBI taxonomy Id: 146021
Other names: ATCC 49403, DSM 44676, JCM 15656, M. houstonense, Mycobacterium houstonense, Mycobacterium houstonense Schinsky et al. 2004, strain W5198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.