STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900078665_06371Unannotated protein. (293 aa)    
Predicted Functional Partners:
GCA_900078665_04325
Unannotated protein.
  
 0.979
GCA_900078665_06243
Unannotated protein.
  
 0.886
GCA_900078665_06244
Unannotated protein.
  
 0.886
GCA_900078665_04327
Unannotated protein.
  
 0.860
GCA_900078665_04328
Unannotated protein.
  
 0.860
GCA_900078665_06370
Unannotated protein.
       0.787
GCA_900078665_05792
Unannotated protein.
  
 
 0.747
GCA_900078665_00525
Unannotated protein.
    
 0.743
GCA_900078665_05805
Unannotated protein.
  
 
 0.709
GCA_900078665_05806
Unannotated protein.
  
 
 0.709
Your Current Organism:
Mycolicibacterium houstonense
NCBI taxonomy Id: 146021
Other names: ATCC 49403, DSM 44676, JCM 15656, M. houstonense, Mycobacterium houstonense, Mycobacterium houstonense Schinsky et al. 2004, strain W5198
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.