STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK03741.1Hydrolase. (152 aa)    
Predicted Functional Partners:
GAK03742.1
Hydrolase.
 
     0.851
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.699
GAK05157.1
3-oxoadipate CoA-transferase subunit A.
  
 
 0.686
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
  0.657
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.657
cinA
Molybdopterin binding motif, CinA N-terminal domain; Belongs to the CinA family.
    
  0.646
GAK02777.1
Glyoxalase family protein.
    
 0.566
GAK03643.1
Catechol 2,3-dioxygenase.
    
 0.566
GAK03995.1
Glyoxalase family protein.
    
 0.566
GAK02245.1
Serine/threonine protein phosphatase.
    
  0.546
Your Current Organism:
Geomicrobium sp. JCM19037
NCBI taxonomy Id: 1460634
Other names: G. sp. JCM 19037, Geomicrobium sp. JCM 19037
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.