STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001310375_04840Unannotated protein. (199 aa)    
Predicted Functional Partners:
GCA_001310375_05931
Unannotated protein.
    
 0.903
GCA_001310375_04839
Unannotated protein.
       0.730
GCA_001310375_04841
Unannotated protein.
       0.674
GCA_001310375_04843
Unannotated protein.
       0.658
GCA_001310375_04844
Unannotated protein.
       0.658
GCA_001310375_04842
Unannotated protein.
       0.644
GCA_001310375_04838
Unannotated protein.
       0.576
GCA_001310375_04690
Unannotated protein.
 
   
 0.554
GCA_001310375_04846
Unannotated protein.
       0.460
GCA_001310375_04845
Unannotated protein.
       0.432
Your Current Organism:
Bacillus sp. JCM19041
NCBI taxonomy Id: 1460637
Other names: B. sp. JCM 19041, Bacillus sp. JCM 19041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.