STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001310415_01106Unannotated protein. (341 aa)    
Predicted Functional Partners:
GCA_001310415_01104
Unannotated protein.
 
   
 0.884
GCA_001310415_01105
Unannotated protein.
 
   
 0.874
GCA_001310415_01103
Unannotated protein.
 
   
 0.771
GCA_001310415_05469
Unannotated protein.
  
     0.751
GCA_001310415_01646
Unannotated protein.
 
     0.733
GCA_001310415_01639
Unannotated protein.
  
     0.713
GCA_001310415_00935
Unannotated protein.
  
     0.705
GCA_001310415_01596
Unannotated protein.
  
    0.697
GCA_001310415_01970
Unannotated protein.
  
    0.694
GCA_001310415_00592
Unannotated protein.
  
     0.688
Your Current Organism:
Enterovibrio sp. JCM19048
NCBI taxonomy Id: 1460642
Other names: E. sp. JCM 19048, Enterovibrio sp. JCM 19048
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