STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAJ99255.1Iron compound ABC uptake transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (318 aa)    
Predicted Functional Partners:
GAJ99256.1
Iron compound ABC uptake transporter, ATP-binding protein.
 
 0.998
GAJ99254.1
Iron compound ABC uptake transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
0.996
GAJ99257.1
Iron compound ABC uptake transporter, substrate-binding protein.
 
 
 0.993
GAJ97891.1
ABC-type Fe3+-siderophore transport system, permease 2 component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 
0.682
GAJ97770.1
Periplasmic binding protein.
  
  
 0.635
GAK00542.1
Ferrichrome transport ATP-binding protein FhuC.
  
 0.611
GAK00538.1
Hypothetical protein.
 
 
  0.515
GAK00168.1
Ferrichrome-binding periplasmic protein precursor.
  
  
 0.506
GAJ97892.1
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.474
GAJ97769.1
Transcriptional regulator, AraC family.
 
 
  0.464
Your Current Organism:
Geomicrobium sp. JCM19055
NCBI taxonomy Id: 1460649
Other names: G. sp. JCM 19055, Geomicrobium sp. JCM 19055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.