STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAK00186.1NmrA family protein. (59 aa)    
Predicted Functional Partners:
GAK00187.1
Oxidoreductase.
 
     0.935
GAJ99762.1
Probable oxidoreductase.
  
 0.926
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.925
GAJ98760.1
Menaquinone-cytochrome c reductase iron-sulfur subunit.
  
 0.920
GAJ99683.1
Cytochrome c oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.882
GAK00876.1
Deoxyadenosine kinase.
   
 0.874
GAJ98761.1
Menaquinone-cytochrome c reductase, cytochrome b subunit.
   
 0.834
GAJ98762.1
Menaquinone-cytochrome c oxidoreductase, cytochrome c subunit.
   
 0.834
GAK00185.1
Transcriptional regulator, DeoR family.
       0.773
GAK01543.1
Peptidase; Belongs to the peptidase M16 family.
   
 0.744
Your Current Organism:
Geomicrobium sp. JCM19055
NCBI taxonomy Id: 1460649
Other names: G. sp. JCM 19055, Geomicrobium sp. JCM 19055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.