STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177C1G5Uncharacterized protein. (498 aa)    
Predicted Functional Partners:
A0A177CVC9
Helicase swr1.
  
0.822
A0A177CY62
Putative mitotic spindle checkpoint protein.
   
 0.778
A0A177BW87
PIN domain-like protein.
   
 0.748
A0A177CD00
WD40 repeat-like protein.
  
  0.743
A0A177CJQ0
WD40 repeat-like protein.
  
  0.743
A0A177CSV8
WD40 repeat-like protein.
  
  0.743
A0A177CED9
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.727
A0A177CUQ3
Uncharacterized protein.
   
 0.722
A0A177BWH3
Actin/actin-like protein; Belongs to the actin family.
   
 0.713
A0A177CM27
YL1_C domain-containing protein.
    
 0.705
Your Current Organism:
Paraphaeosphaeria sporulosa
NCBI taxonomy Id: 1460663
Other names: Coniothyrium fuckelii var. sporulosum, Coniothyrium sporulosum, Coniothyrium sporulosum (W.Gams & Domsch) Aa, P. sporulosa, Paraconiothyrium sporulosum, Paraconiothyrium sporulosum (W.Gams & Domsch) Verkley, Paraconyotrichium sporulosum, Paraphaeosphaeria sporulosa (W. Gams & Domsch) Verkley, Goker & Stielow, 2014
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