STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A177C8I4Zn(2)-C6 fungal-type domain-containing protein. (539 aa)    
Predicted Functional Partners:
A0A177CTN4
WD40 repeat-like protein.
   
 0.638
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.614
A0A177CDZ2
Ipi1_N domain-containing protein.
   
 0.611
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.574
A0A177C5E9
CLP1_P domain-containing protein.
   
  0.540
A0A177CDU1
Alpha-actin-like proteinin.
    
 0.515
A0A177CF51
CRIB domain-containing protein.
    
 0.515
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.502
A0A177D0U8
Nucleolar GTP-binding protein 2.
   
  0.483
A0A177CHQ6
EF-hand.
    
 0.464
Your Current Organism:
Paraphaeosphaeria sporulosa
NCBI taxonomy Id: 1460663
Other names: Coniothyrium fuckelii var. sporulosum, Coniothyrium sporulosum, Coniothyrium sporulosum (W.Gams & Domsch) Aa, P. sporulosa, Paraconiothyrium sporulosum, Paraconiothyrium sporulosum (W.Gams & Domsch) Verkley, Paraconyotrichium sporulosum, Paraphaeosphaeria sporulosa (W. Gams & Domsch) Verkley, Goker & Stielow, 2014
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