STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001273835_01705Unannotated protein. (201 aa)    
Predicted Functional Partners:
GCA_001273835_01704
Unannotated protein.
 
 
  0.993
GCA_001273835_00686
Unannotated protein.
  
  
 0.988
GCA_001273835_00274
Unannotated protein.
 
 
 0.954
GCA_001273835_00270
Unannotated protein.
 
 0.904
GCA_001273835_02000
Unannotated protein.
  
 0.903
GCA_001273835_00271
Unannotated protein.
  
 0.899
GCA_001273835_03443
Unannotated protein.
  
 0.891
GCA_001273835_00352
Unannotated protein.
 
  
  0.890
GCA_001273835_00683
Unannotated protein.
   
 
 0.869
GCA_001273835_00325
Unannotated protein.
  
 
  0.867
Your Current Organism:
Leucobacter celer
NCBI taxonomy Id: 1461260
Other names: CIP 110720, DSM 27159, L. celer subsp. astrifaciens, Leucobacter celer subsp. astrifaciens, Leucobacter celer subsp. astrifaciens Clark and Hodgkin 2015, Leucobacter sp. CBX151, strain CBX151
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.