STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000751595_02177Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_000751595_02181
Unannotated protein.
  
    0.637
GCA_000751595_02176
Unannotated protein.
       0.631
GCA_000751595_02178
Unannotated protein.
 
    
0.599
GCA_000751595_02179
Unannotated protein.
       0.598
GCA_000751595_02180
Unannotated protein.
       0.585
GCA_000751595_02182
Unannotated protein.
       0.433
Your Current Organism:
Weeksella massiliensis
NCBI taxonomy Id: 1461577
Other names: CSUR P860, DSM 28259, W. massiliensis, Weeksella massiliensis Sankar et al. 2017, Weeksella sp. FF8, strain FF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.