STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ99135.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
yhcR
Endonuclease YhcR precursor; Belongs to the 5'-nucleotidase family.
  
    0.858
CDZ99136.1
Hypothetical protein.
 
    0.814
CDZ99133.1
Hypothetical protein.
       0.569
opuCA_1
Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA; Belongs to the ABC transporter superfamily.
       0.569
yicL
Putative inner membrane transporter YicL.
       0.547
hisE
Phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.
       0.431
CDZ99144.1
Hypothetical protein.
 
     0.410
tlyC
Hemolysin C.
       0.405
CDZ99139.1
Hypothetical protein.
  
    0.400
Your Current Organism:
Jeotgalicoccus saudimassiliensis
NCBI taxonomy Id: 1461582
Other names: CSUR P1221, J. saudimassiliensis, Jeotgalicoccus sp. 13MG44_air, strain 13MG44_air
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.