Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEA01552.1 | CEA01555.1 | BN1050_00948 | BN1050_00949 | ABC transporter substrate binding protein. | Ribose ABC transporter permease protein. | 0.998 |
CEA01552.1 | opuCA_1 | BN1050_00948 | BN1050_00950 | ABC transporter substrate binding protein. | Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA. | 0.973 |
CEA01555.1 | CEA01552.1 | BN1050_00949 | BN1050_00948 | Ribose ABC transporter permease protein. | ABC transporter substrate binding protein. | 0.998 |
CEA01555.1 | opuCA_1 | BN1050_00949 | BN1050_00950 | Ribose ABC transporter permease protein. | Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA. | 0.990 |
opuCA_1 | CEA01552.1 | BN1050_00950 | BN1050_00948 | Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA. | ABC transporter substrate binding protein. | 0.973 |
opuCA_1 | CEA01555.1 | BN1050_00950 | BN1050_00949 | Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA. | Ribose ABC transporter permease protein. | 0.990 |
opuCA_1 | potB | BN1050_00950 | BN1050_01238 | Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA. | Spermidine/putrescine transport system permease protein PotB. | 0.420 |
potB | opuCA_1 | BN1050_01238 | BN1050_00950 | Spermidine/putrescine transport system permease protein PotB. | Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA. | 0.420 |