STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEA05088.1Hypothetical protein. (308 aa)    
Predicted Functional Partners:
CEA05086.1
Hypothetical protein.
       0.631
znuB
High-affinity zinc uptake system membrane protein ZnuB.
       0.622
zur
Zinc-specific metallo-regulatory protein.
       0.622
znuC_2
High-affinity zinc uptake system ATP-binding protein ZnuC.
       0.605
queE_2
7-carboxy-7-deazaguanine synthase.
 
     0.504
CEA02370.1
Hypothetical protein; Aerotolerance regulator N-terminal.
  
     0.452
CEA02361.1
Hypothetical protein.
  
     0.418
CEA04031.1
Hypothetical protein.
  
     0.412
Your Current Organism:
Lysinibacillus saudimassiliensis
NCBI taxonomy Id: 1461583
Other names: CSUR P1222, L. saudimassiliensis, Lysinibacillus sp. 13S34_air, strain 13S34_air
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.