Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEA07138.1 | CEA07139.1 | BN1051_00451 | BN1051_00452 | Enterobactin/ferric enterobactin esterase. | Putative oxidoreductase/MSMEI_2347. | 0.546 |
CEA07138.1 | mprF | BN1051_00451 | BN1051_00450 | Enterobactin/ferric enterobactin esterase. | Phosphatidylglycerol lysyltransferase. | 0.957 |
CEA07138.1 | rutG | BN1051_00451 | BN1051_00449 | Enterobactin/ferric enterobactin esterase. | Putative pyrimidine permease RutG. | 0.556 |
CEA07139.1 | CEA07138.1 | BN1051_00452 | BN1051_00451 | Putative oxidoreductase/MSMEI_2347. | Enterobactin/ferric enterobactin esterase. | 0.546 |
CEA07139.1 | mprF | BN1051_00452 | BN1051_00450 | Putative oxidoreductase/MSMEI_2347. | Phosphatidylglycerol lysyltransferase. | 0.535 |
CEA07416.1 | mprF | BN1051_00729 | BN1051_00450 | Alpha/beta hydrolase family protein. | Phosphatidylglycerol lysyltransferase. | 0.600 |
ftsE | lysX | BN1051_01981 | BN1051_00416 | Cell division ATP-binding protein FtsE. | Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX. | 0.454 |
ftsE | mprF | BN1051_01981 | BN1051_00450 | Cell division ATP-binding protein FtsE. | Phosphatidylglycerol lysyltransferase. | 0.413 |
lysX | ftsE | BN1051_00416 | BN1051_01981 | Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX. | Cell division ATP-binding protein FtsE. | 0.454 |
lysX | mprF | BN1051_00416 | BN1051_00450 | Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX. | Phosphatidylglycerol lysyltransferase. | 0.834 |
mprF | CEA07138.1 | BN1051_00450 | BN1051_00451 | Phosphatidylglycerol lysyltransferase. | Enterobactin/ferric enterobactin esterase. | 0.957 |
mprF | CEA07139.1 | BN1051_00450 | BN1051_00452 | Phosphatidylglycerol lysyltransferase. | Putative oxidoreductase/MSMEI_2347. | 0.535 |
mprF | CEA07416.1 | BN1051_00450 | BN1051_00729 | Phosphatidylglycerol lysyltransferase. | Alpha/beta hydrolase family protein. | 0.600 |
mprF | ftsE | BN1051_00450 | BN1051_01981 | Phosphatidylglycerol lysyltransferase. | Cell division ATP-binding protein FtsE. | 0.413 |
mprF | lysX | BN1051_00450 | BN1051_00416 | Phosphatidylglycerol lysyltransferase. | Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX. | 0.834 |
mprF | rutG | BN1051_00450 | BN1051_00449 | Phosphatidylglycerol lysyltransferase. | Putative pyrimidine permease RutG. | 0.556 |
rutG | CEA07138.1 | BN1051_00449 | BN1051_00451 | Putative pyrimidine permease RutG. | Enterobactin/ferric enterobactin esterase. | 0.556 |
rutG | mprF | BN1051_00449 | BN1051_00450 | Putative pyrimidine permease RutG. | Phosphatidylglycerol lysyltransferase. | 0.556 |