STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV83348.1Hypothetical protein. (151 aa)    
Predicted Functional Partners:
KCV83346.1
ABC transporter permease; COG0842 ABC-type multidrug transport system, permease component.
 
     0.949
KCV83347.1
ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
    0.939
KCV83349.1
Hypothetical protein.
 
    0.930
KCV83350.1
Hypothetical protein.
 
    0.898
KCV83345.1
Hypothetical protein; COG0790 FOG: TPR repeat, SEL1 subfamily.
 
     0.843
KCV83351.1
Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants.
 
    0.832
KCV83334.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
    0.828
KCV83352.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
     0.806
KCV83225.1
Hypothetical protein; COG0790 FOG: TPR repeat, SEL1 subfamily.
 
     0.709
KCV83342.1
Quinoprotein ethanol dehydrogenase; COG4993 Glucose dehydrogenase.
  
    0.669
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.