STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV83569.1Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation. (150 aa)    
Predicted Functional Partners:
KCV83776.1
COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 0.999
KCV83768.1
SufS subfamily cysteine desulfurase; COG0520 Selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.998
KCV81640.1
COG1076 DnaJ-domain-containing proteins 1.
  
 
 0.996
KCV81456.1
COG0633 Ferredoxin.
  
 0.991
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.984
KCV83772.1
FeS assembly ATPase SufC; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
  
  
 0.903
KCV83247.1
Iron-sulfur cluster assembly-like protein; Belongs to the HesB/IscA family.
  
  
 0.897
KCV83777.1
Iron-sulfur cluster assembly transcription factor IscR; COG1959 Predicted transcriptional regulator.
  
  
 0.895
KCV81446.1
Hypothetical protein; COG0457 FOG: TPR repeat.
   
 
 0.891
KCV83758.1
Iron-sulfur cluster insertion protein ErpA; Belongs to the HesB/IscA family.
  
  
 0.841
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.