STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV83685.1Hypothetical protein. (725 aa)    
Predicted Functional Partners:
KCV83682.1
COG3628 Phage baseplate assembly protein W.
 
     0.951
KCV83683.1
Putative phage tail region protein; COG3299 Uncharacterized homolog of phage Mu protein gp47.
 
     0.951
KCV83684.1
Hypothetical protein.
 
     0.951
KCV83669.1
COG3497 Phage tail sheath protein FI.
 
     0.801
KCV83670.1
Phage tail region protein.
 
     0.801
KCV83671.1
Hypothetical protein.
 
     0.801
KCV83673.1
Hypothetical protein.
 
     0.801
KCV83674.1
COG0464 ATPases of the AAA+ class.
 
     0.801
KCV83677.1
Hypothetical protein.
 
     0.801
KCV83679.1
Hypothetical protein.
 
     0.801
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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