STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV83820.1GCN5-like N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (145 aa)    
Predicted Functional Partners:
KCV83012.1
N-acetyltransferase GCN5; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
 0.935
KCV83822.1
Hypothetical protein.
 
     0.854
KCV83821.1
Hypothetical protein.
  
    0.851
KCV83823.1
COG3825 Uncharacterized protein conserved in bacteria.
       0.849
KCV81763.1
DNA-binding protein; COG1396 Predicted transcriptional regulators.
  
 
 0.678
KCV83819.1
ATPase; COG0714 MoxR-like ATPases.
       0.669
KCV83825.1
Peptidase M48, Ste24p; COG0501 Zn-dependent protease with chaperone function.
 
     0.540
KCV83824.1
Glycoside hydrolase family protein; COG2273 Beta-glucanase/Beta-glucan synthetase.
       0.536
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.492
dksA
Dnak suppressor protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
  
    0.470
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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